Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMLKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDK-AIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGY-KEVSK |
3IP4 Chain:A ((268-357)) | -----------------------------------------------------------------LGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 23353 for 413 contacts (56.5/contact) +
2D Compatibility (PS) -9535 + (NN) -3778 + (LL) 5168
1D Compatibility (HY) -4400 + (ID) 950
Total energy: 9858.0 ( 23.87 by residue)
QMean score : 0.298
|
|
|