Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------VSERSMKRLMKGAAWL---------TAASLISKILSAIYRVPFQNMV-GDVGFYIFQQ--------VYPIYG---------------------IAMTLALGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIF-------AFLFLFANLIAIMMGDPALSEL-------------IRVISFVF---------------LLMPQLAFMRGFFQGEGDM-IPTAISQTVEQIIRVAIILIGAGLALHFNFDLYDAG----SMAMSGAFFGGVSG---IFILRHFYNKKVRLGEGIQPAVFTN---------KEEKVGIGRTFLRQSVAICVVSS----MLILFQLVD-----------SFQVY----RLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQGQQKELKRSVLLAIKIT----LILSGAET------IGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFG------KIAVPAVGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFV----------EKTMLFRLV---AALVLMAVFPCLFEWLAPLDTRLG--SAFQAIVSALVGGGIFLVFALRYKLLGPKDFVFLPFGSKLLALSKLVARK------------- |
| 4OK4 Chain:A ((30-733)) | HPNLIVTEQDVANIAASWESYDAYAEQLNADKTNLDAFMAEGVVVPMPKDAGGGYTHEQHKRNYKAIRNAGFLYQVTGDEKYLTFAKDLLLAYAKMYPSLGEHPNRKEQSPGRLFWQSLNEAVWLVYSIQGYDAIIDGLAAEEKQEIESG--VFLPMAKFLSVESPETFNKIHNLGTWAVAAVGMTGYVLGNDELVEISLMGLDKTGKAGFMKQLDKLFSPDGYYTEGPYYQRYALMPFIWFAKAIETNEPERKIFEYRNNILLKAVYTTIDLSYAGYFFPINDALKDKGIDTVELVHALAIVYSITGDNTLLDIAQEQGRISLTGDGLKVAKAVGEGLTQPYNYRSILLGDGADGDQGALSIHRLGEGHNHMALVAKNTSQGMGHGHFDKLNWLLYDNGNEIVTDYGAARYLNVEAKY---GGHYLAENNTWAKQTIAHNTLVVNEQSHFYGDVTTADLHHPEVLSFYSGEDYQLSSAKEANAYDGVEFVRSMLLVNVPSLEHPIVVDVLNVSADKASTFDLPLYFNGQIIDFSFKVKDNKNVMKMLGKRNGYQHLWLRNTAPVGDASERATWILDDRFYSYAFVTSTPSKKQNVLIAELGANDPNYNLRQQQVLIRRVEKAKQASFVSVLEPHGKYDGSLETTSGAYSNVKSVKHVSENGKDVVVVDLKD---GSNVVVALSYNANSEQVHKVNAGEEAIEWKGFSSVVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -526246 for 4011 contacts (-131.2/contact) +
2D Compatibility (PS) -55614 + (NN) -1286 + (LL) 948
1D Compatibility (HY) -11600 + (ID) 4250
Total energy: -598048.0 ( -149.10 by residue)
QMean score : 0.191
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