Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGNKLQGKVTGITNFGAFVELE--GGKTGLVHISEVADNYVKDINDILTVGDEVTVKVMNIG-DDGKIGLSIRKAVDRPDRPEKSYDRKPKYNKKPAGNYVKPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG
3CW2 Chain:C ((12-87))
-----GEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENRKVIVKVIRVDRRKGTVDVSLKKVTD----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36122 for 468 contacts (-77.2/contact) +
2D Compatibility (PS) -7788 + (NN) 635 + (LL) 2872
1D Compatibility (HY) -8800 + (ID) 1200
Total energy: -50403.0 ( -107.70 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_3CW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CW2-query.scw
PDB file :
Tito_Scwrl_3CW2.pdb
: