Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIANSITDLIGKTPIVKLNRLPEAGSADVYVKLEFQNPGGSVKDRIANAMIESAEKSGALKPGDTIIEPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLERRKLLQAYGAKLVLTPGPDGMKGAIAKAEELAKEN--NYFVPQQFHNPANPAVHEETTGPEIVEAFGKDG-LDAFIAGVGTGGTVTGVGHVLK--KNYPDVKIYALEPEESPVLSGG------SPSPHKIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATIKAALDLAK-ELGAGKKVLAIVASNGERYLSTPLYNFED |
1OAS Chain:A ((7-311)) | ----NSLT--IGHTPLVRLNRI---GNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWE--DTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104857 for 2649 contacts (-39.6/contact) +
2D Compatibility (PS) -32785 + (NN) -18022 + (LL) 1172
1D Compatibility (HY) -28800 + (ID) 8350
Total energy: -191642.0 ( -72.35 by residue)
QMean score : 0.560
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