Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTTIQQLVKHVSVREFKNERLSDETKQHLLTAARSASSSHFVQSFSILEITDEKLRKELAEITNSASYVNQTGTFYVFVGDLYRQSKLLLENNRTLDGLRNMESLLVSVIDATIAAQNMVIAAESLDLGICYIGGIRNDIGKVAELLNLPPFTIPVFGLTVGVPEYKNQVKPRLLLENQVGENQYPHEQ---FTDLKAYEELTKDYYALREKNQHQTSWGDKNVE-FFEEI---R-RPEIASFLKKQGFTLD |
3EOF Chain:A ((1-248)) | --GMMDTVKNRRTIRKYQQKDITPDLLNDLLETSFRASTMGGMQLYSVVVTRDAEKKEILSPAHFNQPMVKEAPVVLTFCADFRRFCKYCQERNAVP-GYGNLMSFLNAAMDTLLVAQTFCTLAEEAGLGICYLGTTTYNPQMIIDALHLPELVFPITTVTVGYPAESPKQVDRLPIEGIIHEESYHDYTAEDINRLYAYKESLPENKLFIEEN-QKETLPQVFTDVRYTKKDNEFMSENLLKVLRRQGFMD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EOF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91278 for 1747 contacts (-52.2/contact) +
2D Compatibility (PS) -26256 + (NN) -11570 + (LL) 96
1D Compatibility (HY) -11600 + (ID) 2700
Total energy: -143308.0 ( -82.03 by residue)
QMean score : 0.518
|
|
|