Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFG--HGNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQKNRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQ-KRIHYLNRQIPTKRELTEAARLIQASKTPVIIVG-GGARYSDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGPATKFININVSRMQTYKLDAFQV--VGDAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQT----EFTQTEALITINDTVAPDSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALED---AKKQTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY |
| 1V5F Chain:A ((17-536)) | ----------------------------------GADTIYGIPSGTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVM--QSKFGGNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAI----LGSRPQ----RELNMDAFQELNQNPMYDHIAVYNRRVAYAEQLPKLVDEAARMAI--AKRGVAVLEVPGDFAKVEIDNDQWYSSANSLRKYAPIAPAAQDIDAAVELLNNSKRPVIYAGIGTMGHGPAVQEL---ARKIKAPVITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFP-FSEVEGT-FRNVDNFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKVDAVEES---------AWWTANLKNIANWR--------------------EYINMLETKEEGDLQFYQVYNAINNHADEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTYPDRQ-VWNIIGDGAFSMTYPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNLFGVDFTD-------VDYAKIAEAQGAKGFTVSRIEDMDRVMAEAVAANKAGHTVVIDCKI------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1V5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -195582 for 4579 contacts (-42.7/contact) +
2D Compatibility (PS) -55327 + (NN) -26171 + (LL) 9536
1D Compatibility (HY) -22400 + (ID) 6900
Total energy: -296844.0 ( -64.83 by residue)
QMean score : 0.398
|
|
|