Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERF------DGKVVLEVPVSAP-IKDAEKVINAALALIDEK
2L2Q Chain:A ((4-106))
-SMNIL--LVCGAGMSTSMLVQ-RIEKYAKSKNINATIEAIAETRLSEV-----VDRFDVVLLAPQSRFN-KKRLEEITKPKGIPIEIINTIDYGTMNGEKVLQLAINAFNNK
General information:
TITO was launched using:
RESULT:
Template:
2L2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44664 for 668 contacts (-66.9/contact) +
2D Compatibility (PS) -10974 + (NN) -5790 + (LL) 904
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -66324.0 ( -99.29 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2L2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2Q-query.scw
PDB file :
Tito_Scwrl_2L2Q.pdb
: