Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MTTIFPKEQNVTPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFA------KIILSAYR------QSDVSALLLGVCG-----------------------RTLFELLRQAFLIPKKLTVDNPFFLTD-KEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEP----DFSISTKRINKKRG--ILVLYSLPDTLKSGMTESEVYA--FIWKTFL---HIQEIIPSSR---IFYGQETSENADELGVFL-------PIHHFEKKMLQNIEQ----------VNELVDALREQMVNK--- |
| 1GYT Chain:A ((180-503)) | IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKE-LGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTD---AEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQL-ESNFADMANIG-GRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRS-GKAKGATGRPVALLAQFLLNRAGFNGEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37221 for 2014 contacts (-18.5/contact) +
2D Compatibility (PS) -25409 + (NN) -369 + (LL) 760
1D Compatibility (HY) -4400 + (ID) 1900
Total energy: -68539.0 ( -34.03 by residue)
QMean score : 0.233
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