Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLPLSLMVIKVRHWRELKRFQSEDEMRLALQDISAILETCIR-TSDVLYLLDKDDATWGLLLLTDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV |
2W01 Chain:A ((439-498)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------RRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDEFMG--DGILVLF------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29232 for 305 contacts (-95.8/contact) +
2D Compatibility (PS) -6204 + (NN) 951 + (LL) 19300
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -18285.0 ( -59.95 by residue)
QMean score : 0.652
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