Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVT-KARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDAVRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTHGT----TAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVP-GDTTAETLA-AMIADEAAIGVINN---KTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN- |
| 5A07 Chain:A ((40-434)) | DHDAEVLDSIMDRLHEPLYEKDT---FDPNEVLAENKQLYEEFLLQEISEPKVDNLVRSGDPLAG---------KAKGTILSLVR----NSDLEDIISSIQQLEEEYNKNFGYPYTFLNDEEFT---DEFKDGIKSILPKDRVVEFGT--------IGPDNWNMPDSIDRERYDQEMDKMSKENIQYAEVESYHNMCRFYSKEFYH--------HPLLSKYKYVWRL------EPNVNFYCKINYDVFQFMNKN-----------DKIYGFV-LNLYDSPQTIET----LWTSTMDFVEEHPNYLNVNGAFAWLKDNSQN--PKNYDYTQGYSTCHFWTN-----FEIVDLDFLRSEPYEKYMQYLEEKGGFYYERWGDAPVRSLALALFADKSSIHWFRDIGYHHTPYTNCPTCPADSDR---CNGNCVPGKFTPWSDLDNQNCQATWIRHSMSEEELEMY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109899 for 3056 contacts (-36.0/contact) +
2D Compatibility (PS) -39774 + (NN) 340 + (LL) 3348
1D Compatibility (HY) -11200 + (ID) 3400
Total energy: -160585.0 ( -52.55 by residue)
QMean score : 0.205
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