Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAFDLEDFLTTAITDYAKEKVEAGTWDEEESLAKSQDSFNKLLYDGITTPNEYLYSIISGEKIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLAALDVLAKEMQITKIGLHVFAHNQTAIGLYNKVGFQNTDI-TMAKYL
4QUS Chain:A ((45-135))
-----------------------------------------------------FLVAEVNGDVVGTVMGGYD----GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHADVLSLGKRL
General information:
TITO was launched using:
RESULT:
Template:
4QUS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67911 for 530 contacts (-128.1/contact) +
2D Compatibility (PS) -9588 + (NN) -342 + (LL) 3656
1D Compatibility (HY) -6000 + (ID) 1100
Total energy: -81285.0 ( -153.37 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4QUS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QUS-query.scw
PDB file :
Tito_Scwrl_4QUS.pdb
: