Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIEIYTVNGESIRLDDDAKINNISIHELSKADLKNLFNEKCIELTKYDLTYFINTNQVNWFLVSEGIH
2JPP Chain:A ((8-21))
--------VGESINIGDDITIT-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JPP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1746 for 42 contacts (41.6/contact) +
2D Compatibility (PS) -1581 + (NN) -1053 + (LL) 4692
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 2254.0 ( 53.67 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2JPP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JPP-query.scw
PDB file :
Tito_Scwrl_2JPP.pdb
: