Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTIS----KWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
3LFP Chain:A ((1-64))
MLIRRLKDARLRAGISQEKLGVLAGIDEASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYL-------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LFP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30185 for 395 contacts (-76.4/contact) +
2D Compatibility (PS) -6298 + (NN) -2116 + (LL) 10308
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -31691.0 ( -80.23 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_3LFP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFP-query.scw
PDB file :
Tito_Scwrl_3LFP.pdb
: