Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LDDKLQKKLTLLPESPGCYIYRDENNEILYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIRDLELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEVKRDGAHYFGPYPGRFSARQTVDLIEKLFPLCRCDGKPGRPCLYYHLGLCLGPCQAEIEPAVYKKQIHKISRFLEGDVKNVKDKLLGDMLTATENLEFERAAELRDKIHAINETIEKQHIIFPGLKNRDIIGCYEQDNYLSVFVFFVRNGAINGSKWHVFQVEKTLQEELATFLNQFYEDPNNIQPKELLIAEKIDKSLLNEPLRKACLFPQKGSKKKQVDLAIENAKSAYIAYAKMKEYDFEIQLNNH |
1YD6 Chain:B ((8-95)) | -------KLAVLPEQPGCYLMKDKHGTVIYVGKAKSLKERVRSYFTGTHDGKTQRLVEEIADFEYIVTSSNAEALILEMNLIKKHDPKYNVMLKD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41096 for 601 contacts (-68.4/contact) +
2D Compatibility (PS) -9212 + (NN) -4604 + (LL) 18892
1D Compatibility (HY) -10800 + (ID) 2300
Total energy: -49120.0 ( -81.73 by residue)
QMean score : 0.533
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