Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIVAAITAKIQKA-K--LPTHVEATRKDGFEKDSVILLEQIRTIDKQRLTDKITHLDEDLMAKVNKALEVSLGVVEF
3VUB Chain:A ((12-99))---------------------SRYRLFVDVQSDIIDT-PGRRMVIPLASARLLSDKVSRELYPVVH-IG--DESWRMMTTDMASVPVSVIGEEVADLS-HRENDIKNAINLMFW----


General information:
TITO was launched using:
RESULT:

Template: 3VUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41432 for 507 contacts (-81.7/contact) +
2D Compatibility (PS) -9327 + (NN) -2428 + (LL) 2268
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -55319.0 ( -109.11 by residue)
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_3VUB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VUB-query.scw
PDB file : Tito_Scwrl_3VUB.pdb: