Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVNKFMELLGEKLMPLAAKLGE-NRYLTTLRDAFMLAFPLTMFGSIAVVLMNLPFWSDETKAVLQ-----LYLGNAQSATMSIMTVFVVFGIGYSLSKYYKVEAIYGGAVALASFLILTPFFFNSPDGELITGALSLDRLGAKGMFIGMITGFIAAELYRFFVQRDWTIKMPAGVPPAVAKSFAALIPAILTLSIFLAINV----MVQFFFHTNLHDVVYTVIQKP-----LVGLGSGIVPTL-IALFFVQVLWFFGLHGQIIVNSVMDPIWNTLMLENLDAYKAGLPLPHII-TKPFMEVFTVGMGGSGMTLAVVIAL-------AFLMKSKQSKEIGRLALGPGIFNVNE----PVLFGMPIVL-NATILIPWIIAPLIVT-TLNYFVMAAGIVPAPTGVAVPWTVPIVINGILATNSWLGGALQVVDFFIVLIIWYPFLKLVDRTNIARESEAAIK
3GRE Chain:A ((1031-1454))-ESIEKFLSTFILPPLRDYKEFGPIQEIVRSPNMGNLR----GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF---DAFAVSSKDGQII--VLKVNHYQQES-----EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH---------------------------APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPFSDVFIPTQVTANLTMLLRKMK----HDIINSISTCEVDETPLLVACDNSGLIGIFQ----


General information:
TITO was launched using:
RESULT:

Template: 3GRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -388511 for 3038 contacts (-127.9/contact) +
2D Compatibility (PS) -39539 + (NN) 7556 + (LL) 4232
1D Compatibility (HY) -12400 + (ID) 3650
Total energy: -432312.0 ( -142.30 by residue)
QMean score : 0.154

(partial model without unconserved sides chains):
PDB file : Tito_3GRE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GRE-query.scw
PDB file : Tito_Scwrl_3GRE.pdb: