Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVKVVFVCLGNICRSPMAEGLFRKEVANAGLTDEI-KIDSAATGTWNLGKPPHRGTQEVLKKHGVDYQAMRARKISDADFKEADFIIGMDQQNLADLNALN---NNPDVIIRSLMSFVSGQEDKDIPDPYY--TGDFDETERMVTEGVKALLAYITKK
1D1P Chain:A ((7-156))
-ISVAFICLGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-HKGKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSKQFL------
General information:
TITO was launched using:
RESULT:
Template:
1D1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45961 for 1205 contacts (-38.1/contact) +
2D Compatibility (PS) -15561 + (NN) -4854 + (LL) 940
1D Compatibility (HY) -13600 + (ID) 2600
Total energy: -81636.0 ( -67.75 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_1D1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1P-query.scw
PDB file :
Tito_Scwrl_1D1P.pdb
: