Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPR-KNDDVFDYPYNK
2XPI Chain:B ((4-24))
----------------------------------------------------------------------------------MLRRNPTAIQITAEDVLAYDEEK
General information:
TITO was launched using:
RESULT:
Template:
2XPI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2638 for 58 contacts (45.5/contact) +
2D Compatibility (PS) -1914 + (NN) 1547 + (LL) 9804
1D Compatibility (HY) 1600 + (ID) 50
Total energy: 13625.0 ( 234.91 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2XPI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XPI-query.scw
PDB file :
Tito_Scwrl_2XPI.pdb
: