Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSFLLKNLITDKEKPIIVYGHMSPLMLVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADPSMFICTEELPNNLTITGC-PVLTQDQLMDALEKHFGEVPDKEA--CVNNDDNYYIIYTSGSTGNPKGVQISQNNLVSFSNWILQDF-SLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTLV-----PLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDENFNQENNPRLTRFLFCGEVLAKKTASELLDRFPDAVIYNTYGPTEATVAVTQVKVTREIIDAYPSLPLGVIKPDMRLHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFD--YKG--YQAYRTGDSGIIKD-GYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPKMKDEKVDMLVAQVIPTTHDFEKEYQLSAAIKKELKEFMPAYMIPRKWIYKTDFPLTMNGKIDRKSLNSEVNK |
| 4DG9 Chain:A ((55-519)) | ------------------------------YRQLLDSAEQLSDYLLEH-YPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPANGLPCVPV-----------RHLPAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLC--LGQSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLGPLDPGV---LRQLIGERGADS--AWLTASLFNTLVDLDPDCLGG----LRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEE-DDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVRERNGVKQLLCAWTGKAD-----------ASPQALLRQLPTWQRPHACVRVEALPLTAHGKLDRAAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220728 for 3617 contacts (-61.0/contact) +
2D Compatibility (PS) -46855 + (NN) -19281 + (LL) 4612
1D Compatibility (HY) -24400 + (ID) 6350
Total energy: -313002.0 ( -86.54 by residue)
QMean score : 0.489
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