Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKD----GMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK
3U7J Chain:A ((15-215))
----KRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAAVKDR--YRGAVSSSVATTERLKSHGIRVFDLNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFVCIADASKRVAMLGQFPLPVEVVPMARTAIGRRLAALGGVPVLRVKQDGTPYVTDNGNEILDVKGLRIDDPRALEAAINGWPGVVTVGLF---------------------
General information:
TITO was launched using:
RESULT:
Template:
3U7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59311 for 1641 contacts (-36.1/contact) +
2D Compatibility (PS) -21741 + (NN) -7934 + (LL) 2572
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -102964.0 ( -62.74 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3U7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U7J-query.scw
PDB file :
Tito_Scwrl_3U7J.pdb
: