Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGAN------ET--ISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 2KGW Chain:A ((232-300)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIPADYEILNRVADKLKACP-----DARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGL---------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -30316 for 363 contacts (-83.5/contact) +
2D Compatibility (PS) -6709 + (NN) -5628 + (LL) 25888
1D Compatibility (HY) -400 + (ID) 550
Total energy: -17715.0 ( -48.80 by residue)
QMean score : 0.631
|
|
|