Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSIRPELRDIQVSGIRTFNTRVTGIPDMIRLTLGEPDFPTPDHVKQAAISAIEENFTNYTPNAGMPELLEAASIYFHEKYDLSYS-NKEIIVTVGATEAISVALQTILEPGDEVILPDPIYPGYEPLITLNKAHPVKVDTT--ETNFKLTPEQLKAHITPKTKALIIPYPSNPTGVTLSKDELSALAEVLKETGIFVIADEIYSELTY-HEEHVSIAPM--LRDQTIVINGLSKSHAMIGWRIGFLLAPEILTQEMLKIHQYSVTCASSISQKAALEAITNGKDDAFQMRTEYKTRANFTQDRLEKMGFTVIPPDGAFYFFVKLPDEIA-ENSFDWAVKLAEEAKVAVVPGNAF---SEKGDRY---FRLSYATSFNNLAEALDRMAQFVEK |
| 2O0R Chain:A ((28-394)) | ------------------------------VNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGT-YFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDP---ADVWNHLVRFTFCKRDDTLDEAIRRLSVLAE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217213 for 3113 contacts (-69.8/contact) +
2D Compatibility (PS) -38510 + (NN) -23432 + (LL) 2244
1D Compatibility (HY) -22800 + (ID) 5600
Total energy: -305311.0 ( -98.08 by residue)
QMean score : 0.550
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