Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFITGNAGTVFGEWAVVEPLLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRDQVTIGDNAVIMMGASINIGSVIGDGTMIDMNVVL--GGRATVGKNCHIGAGSVLAGVVEPPS----------AQPVIVEDNVVVGANVVVLEGVRIGEGAVVAAGAIVTKDVAPGTVVAGIPARELKKLDAKTASKTEIMQELRQL
3NZ2 Chain:A ((79-187))
---------------------------------------------------------------------------------------------------------------------------IGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVNQDVPPDTLVGGTPARILRSLK----------------
General information:
TITO was launched using:
RESULT:
Template:
3NZ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95038 for 706 contacts (-134.6/contact) +
2D Compatibility (PS) -11092 + (NN) -1942 + (LL) 10324
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -110248.0 ( -156.16 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_3NZ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NZ2-query.scw
PDB file :
Tito_Scwrl_3NZ2.pdb
: