Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAAKNV--GTVMSTHVIPRPHTDVEEILPVRVKSDE
3CIM Chain:A ((3-91))
--IAVGMIETRGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIEAANRVNGGEVLSTHIIARPHENLEYVLPI------
General information:
TITO was launched using:
RESULT:
Template:
3CIM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37242 for 680 contacts (-54.8/contact) +
2D Compatibility (PS) -9847 + (NN) -4294 + (LL) 684
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -62849.0 ( -92.43 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3CIM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CIM-query.scw
PDB file :
Tito_Scwrl_3CIM.pdb
: