Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKDGGVDIDECAAVSEKVSEKMDEN--DPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF
1IB8 Chain:A ((8-162))
-ATIVELVREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSKARLAVKL
General information:
TITO was launched using:
RESULT:
Template:
1IB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57727 for 978 contacts (-59.0/contact) +
2D Compatibility (PS) -16707 + (NN) -8928 + (LL) 312
1D Compatibility (HY) -18000 + (ID) 3200
Total energy: -104250.0 ( -106.60 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1IB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IB8-query.scw
PDB file :
Tito_Scwrl_1IB8.pdb
: