Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LNVRANRVSEQMKKELGDILNRKIKDPRLGFVTVTGVDVTGDLQEAKVFISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNRIDELLRDLNNDQ
3EN6 Chain:A ((102-161))
-----------------------------------------------------------------------FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL----
General information:
TITO was launched using:
RESULT:
Template:
3EN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8810 for 157 contacts (-56.1/contact) +
2D Compatibility (PS) -3768 + (NN) 3075 + (LL) 4868
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -9685.0 ( -61.69 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_3EN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EN6-query.scw
PDB file :
Tito_Scwrl_3EN6.pdb
: