Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGIIPLWKERGMTSHDCVYKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVNTKELAEISAAELQAALTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDTALNQSNPTFQLEIACGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCL-TLTEI--------DEMMQASDSSFLYPLEKGIESMAKLVIEEEVYAKVLNGGLLPTSLFAEVE-----NEPRAALIFKDKLTAIYKPHPEKKDLWKPEKVIELNQA |
| 3HJW Chain:A ((40-294)) | --GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLH------------------GDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLR---------------TRKVYYIEVLEIEGRDVL--------FRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156650 for 1789 contacts (-87.6/contact) +
2D Compatibility (PS) -25230 + (NN) -2485 + (LL) 3644
1D Compatibility (HY) -16800 + (ID) 4400
Total energy: -201921.0 ( -112.87 by residue)
QMean score : 0.463
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