Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSINDKGCEAFISMVQGQVQSYQLDKNSI-PSVADLVSGGYLKANQKSCPNGNSIKIDSSGNVSEKK
1X6Z Chain:A ((25-59))
-------------------------------------GTEFARSEGASALASVNPLKTTVEEALSRGWSVKS------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6469 for 161 contacts (-40.2/contact) +
2D Compatibility (PS) -3498 + (NN) 491 + (LL) 4972
1D Compatibility (HY) 1200 + (ID) 150
Total energy: -3454.0 ( -21.45 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_1X6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X6Z-query.scw
PDB file :
Tito_Scwrl_1X6Z.pdb
: