Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQGTVKWFNAEKGFGFIERENGD-DVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAANVQKA
1MJC Chain:A ((7-67))
---GIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNV---
General information:
TITO was launched using:
RESULT:
Template:
1MJC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32827 for 388 contacts (-84.6/contact) +
2D Compatibility (PS) -6486 + (NN) -2982 + (LL) 760
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -50435.0 ( -129.99 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1MJC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJC-query.scw
PDB file :
Tito_Scwrl_1MJC.pdb
: