Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKSRFFSDV-AET--SSFVFAVAGADDEVVLETIRLALKQKLGKFLLFGKKEDKT------LTANESVTWIQTDTA---------------------------EAAAQGAILAVKNKEADILVKGFIPT-ATLMHHVLKKENGLRTD-QLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENALAVAHQIGITNPKIALLSAVEEVT---AKMPSTLEAQEVVQHFGNQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAPNIETGNALYKSLVYFAGAK-VGSAVVGAKVPIVISSRNDSPENKLASFILTVRLVEK |
1TD9 Chain:A ((10-328)) | -----LFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGMEDLVQAFVERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQ-IIKTKEGVKKTSGVFIMARG--EEQYVFADCAINIAPDSQDLAEIAIESANTAKMFDI-EPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171600 for 2462 contacts (-69.7/contact) +
2D Compatibility (PS) -30261 + (NN) -13622 + (LL) 824
1D Compatibility (HY) -6800 + (ID) 2800
Total energy: -224259.0 ( -91.09 by residue)
QMean score : 0.428
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