Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKFTYDVVIIGSGASGTTVAFEAQAA-GLKVAIVEERN---------WGGTCVLRGCDPKKVLI-GA------REARNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEA-GIETFFGAASFQDSHSLQVGD---------DLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFEFASIALA---AGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIE-NDGGKLHIKGKDSFSLQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAALVAKNVIGVNEKIT-YPAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTS-WYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN |
| 2WPE Chain:A ((8-474)) | -----FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKA----NWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI--TDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225804 for 3707 contacts (-60.9/contact) +
2D Compatibility (PS) -46649 + (NN) -12282 + (LL) 1336
1D Compatibility (HY) -27200 + (ID) 6400
Total energy: -316999.0 ( -85.51 by residue)
QMean score : 0.416
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