Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLER
1XAX Chain:A ((21-146))
-------------------EEQIVQWATGAVQPEG--NEVEMTVRIVDEAESHELNLTYRGKDRPTNVLSFPFECPDE------------VELPLLGDLVICRQVVEREASEQEKPLMAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGF--
General information:
TITO was launched using:
RESULT:
Template:
1XAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35294 for 913 contacts (-38.7/contact) +
2D Compatibility (PS) -13136 + (NN) -3312 + (LL) 2628
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -58114.0 ( -63.65 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_1XAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XAX-query.scw
PDB file :
Tito_Scwrl_1XAX.pdb
: