Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYAIIETGGKQIKVEAGQEIYVEKLAGEVGDVVTFDKVLFVGGDSAKVGVPFVEGA---TVTAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAINA
2ZJR Chain:O ((5-98))
----IQTGGKQYRVSEGDVIRVESLQGEAGDKVEL-KALFVGGEQT----VFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGI--
General information:
TITO was launched using:
RESULT:
Template:
2ZJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5638 for 523 contacts (10.8/contact) +
2D Compatibility (PS) -8971 + (NN) 7756 + (LL) 912
1D Compatibility (HY) -6400 + (ID) 2250
Total energy: -3315.0 ( -6.34 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJR-query.scw
PDB file :
Tito_Scwrl_2ZJR.pdb
: