Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLESVEQFN-AIKSEGKSVFM--FSADWCGDCKFIEPVMPEIEAENEDFSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDR-KTKEEINDFLAAI
1TRS Chain:A ((2-105))
VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDAQDVASEAEVKATPTFQFFKKGQKVGEFSGANKEKLEATINELV---
General information:
TITO was launched using:
RESULT:
Template:
1TRS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38937 for 676 contacts (-57.6/contact) +
2D Compatibility (PS) -10658 + (NN) -6085 + (LL) 492
1D Compatibility (HY) -8000 + (ID) 1550
Total energy: -64738.0 ( -95.77 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1TRS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TRS-query.scw
PDB file :
Tito_Scwrl_1TRS.pdb
: