Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLVGFDIDLAKAVFAEYGIKAKFT--PIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFSQPYMKNEQVLVTLKSSNINQ-FSDMKNKTLGAQNGAS--SIDDMAKKPEVLTDIINNNEPELYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATD---FAV----GMRKSDKELQKKINEAFEKLYKEGKMQEISKKWFGDDEIAKQ |
1HSL Chain:A ((4-231)) | ------------------------------------QKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRINTQCTFVENPLDALI--PSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGI-EIVS------YQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKF--GGPAVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93455 for 1683 contacts (-55.5/contact) +
2D Compatibility (PS) -23139 + (NN) -10108 + (LL) 4040
1D Compatibility (HY) -14000 + (ID) 3500
Total energy: -140162.0 ( -83.28 by residue)
QMean score : 0.519
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