Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGIMNSLLKQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETGFVLENLFIGMTED-LGKM------NAFARELGKAQFITSLGISRILFHIRLL-----EEFLLDYASEIKTKSANYRELYLFSIKLHQVFSSFTQNLIEGYTHANEQMIVQKENQIIKESTKLIWIAENVFLLPLIGKITDERAKQITETALFEVCEQPVNYLIIDLSGVQLESPNIGKYIEYFFSSLKLVGVTPIITGMQPQTAKVMVQANLTEQHGIKTFATLRQATKTLMKEKEARNAHK |
3PMC Chain:A ((11-135)) | --LCRYLKERQEKFISDWKKKVIIRERDPY--------K--EEIIKNGEHLLSAFIMYLKEEISLQEIEITSKKIARERIDAKVNIAEFIHNTNVAKIEIMNILTLLNP--------DLQQYQALVKKINQFFDHLIYYTVHSYY--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64743 for 713 contacts (-90.8/contact) +
2D Compatibility (PS) -12520 + (NN) -10133 + (LL) 13628
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -77568.0 ( -108.79 by residue)
QMean score : 0.424
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