Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLITNKQGLVGAITVPGDKSMSHRSIMFGAIAEGKTVIRHFLRADDCLGTIKAFKALGVKI----EETDEEIIVHGTGFDGLKQADGPLDI--GNSGTTIRLMMGILAGRDFDTVILGDESIAKRPMNRVMLPLQQMGAKMHGKDGSEFAPITITGKQSLKRMEYHMPVASAQVKSAIIFAALQAEGETIIHEK-----EKTRDHTEHMIRQFGGEIEMDGLT-IRVKGGQKFTGQ-EMTVPGDVSSAAFFIVAGLITPGSEIELTHVGLNPTRTGI--FDVVKQMGGSLVVKDSSRSTGKLAGTVVVKTSKLKGTEIDGDIIPRLIDEIPVIALLATQAEGTTIIKDAAELKVKETNRIDAVATELNKMGADITPTEDGLIIHGKTPLHAANVTSYGDHRIGMMLQIAALLVEEGDVELERPEAVSVSYPTFFEDIRSLLK |
| 2QFS Chain:A ((14-420)) | -----------GTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNG----GPLHAEGALELFLGNAGTAMRSLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS-QFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGT-VKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTR---------GELNAIDMDMNHIP---DAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVAL--SDTPVTILDPKCTAKTFPDYFEQL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184185 for 3639 contacts (-50.6/contact) +
2D Compatibility (PS) -40730 + (NN) -5456 + (LL) 3416
1D Compatibility (HY) -27600 + (ID) 6500
Total energy: -261055.0 ( -71.74 by residue)
QMean score : 0.498
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