Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKDPS-VHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKHN
1FB1 Chain:D ((11-195))
--ELNLPNLAAAYSSILSSLGENPQRQGLLKTPWRAASAMQFFTKGYQETISDVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVGKVHIGYLP-NKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALRPAGVGVVVEATHMCMVMRGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIR--
General information:
TITO was launched using:
RESULT:
Template:
1FB1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97244 for 1352 contacts (-71.9/contact) +
2D Compatibility (PS) -20067 + (NN) -7698 + (LL) 396
1D Compatibility (HY) -18400 + (ID) 4600
Total energy: -147613.0 ( -109.18 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1FB1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FB1-query.scw
PDB file :
Tito_Scwrl_1FB1.pdb
: