Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDAEPAVGGKVRYFFPEKIIRDIGGIPAITGENLVANLKQQAETFHPTIVCSERVVDVTKLA--DGTFQLTSHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFPFAIHYDVKNIEQ--------FRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAHE---ESVRELKNSRVEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALFINHGVKVDLGTMAEWGFKQADFG-IVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG
4YKF Chain:A ((211-515))---DAYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQI---LDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMN---------VPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKN--VDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWL-EGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATG--EGAKASLSAFDYL-------------------


General information:
TITO was launched using:
RESULT:

Template: 4YKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185176 for 2494 contacts (-74.2/contact) +
2D Compatibility (PS) -31306 + (NN) -9082 + (LL) 2840
1D Compatibility (HY) -14400 + (ID) 4300
Total energy: -241424.0 ( -96.80 by residue)
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_4YKF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YKF-query.scw
PDB file : Tito_Scwrl_4YKF.pdb: