Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKIVLVDDEPLILKGLESIIPEFEQSIEIIGTAKNGAVALDLFANQEVDVLLTDIEMPVMNGLELIDEWKKRQPATKTIVLSGFEDFHYVKRGLSAGIENYLLKPLNEQELKETLIQIEKKQMTDSVIPREEAYYILRDNTIWRWLNLRINKEEWEERLALYDMALNPKENAVLIQIQATKEIDLAEWKNLSEQYRKDFSFMLLTPENEIIVGITEQTSISEQILAIHQDMKKRISNEAFYLFISEKVQGEMMYPQAFRQLTRLLPERLVQEPGSLIAYQKRTKHTWRPKRKQHQLAKLLVMNNEKEIKAWINNFFKEWNDHKLESDPHQMLHILNELLVMMAESDPKELSESMGRIAEETSIEGLEEATLAYAIRYYNRKKQTDESKSPIIQNVLSYITEHFAEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIHQ |
| 4QYW Chain:A ((3-118)) | --RVLIVDDAAFMRMMLKDIITK--AGYEVAGEATNGREAVEKYKELKPDIVTM-ITMPEMNGIDAIKEIMKIDPNAKIIVASAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKVS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -73623 for 936 contacts (-78.7/contact) +
2D Compatibility (PS) -12093 + (NN) -4166 + (LL) 31180
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -69202.0 ( -73.93 by residue)
QMean score : 0.686
|
|
|