Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
4E1A Chain:A ((4-156))
-----AVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL-
General information:
TITO was launched using:
RESULT:
Template:
4E1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106800 for 1198 contacts (-89.1/contact) +
2D Compatibility (PS) -16934 + (NN) -10228 + (LL) 212
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -154850.0 ( -129.26 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_4E1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E1A-query.scw
PDB file :
Tito_Scwrl_4E1A.pdb
: