Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVLVFAAFIVLFSFSFLSTGLTAQAALKDGTYSVDYTVIQGDSDSASMANDYFDKPATVTVNGGKSTVSLQVNH-SKWITGLWVEGN----AVSVTSKNASSDTRKVSFPVSTLSNPVNAKIKVDIDDDDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNTTTPATKSDSSNKVTNPKSSDSSQMFLYGIIFVATGAGLILLKRRAIFK |
3QZO Chain:A ((12-122)) | -----------------------------------INFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYYFQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIVVPQ--INYNHRYTTHLEFEKA---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28946 for 692 contacts (-41.8/contact) +
2D Compatibility (PS) -12082 + (NN) -7333 + (LL) 6528
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -49133.0 ( -71.00 by residue)
QMean score : 0.454
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