Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVIFSGIQPSGQLTLGNYIGALKQFGQFQDE-YECFYCIVDEHAITVPQDRL-KLREQTRSLAALYLAVGLDPEKSTLFIQSEVAAHAQAAWILQCNVYIGELERMTQFKDKSAGKAGVSAGLLTYPPLMAADILLYQTDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPT-KKMSKSDANLKNAIFLLDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIASIEEKYVGKGYG-------DFKTDLAELVVSELEPIQERYYAYLKSEE-LDTILDAGAEKAARVANKTLKKMENGVGLGRKRRK |
| 2G36 Chain:A ((15-338)) | ----ILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI----DLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAIL----SRVPKLPGTDGRKMSKSYGNIIN---LEISEKELEQTILRMMTDPARV----RRSDPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121700 for 2377 contacts (-51.2/contact) +
2D Compatibility (PS) -32364 + (NN) -9122 + (LL) 1464
1D Compatibility (HY) -26400 + (ID) 5800
Total energy: -193922.0 ( -81.58 by residue)
QMean score : 0.511
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