Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNANGNLKKCPITISSYTLGT---EVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVT-EVEYITQ--WGTAEDR-TAEQQKKEQTTFHMARLFGVKHINCGL--LE--------KIPEEQIIVALGELCDRA---EELIIGLEFMPY---SGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVA--------------TGLEYAALKVYNATKKVLDEAWPEISPR |
| 3VYL Chain:A ((1-286)) | ---------MARIGIHSFVWSASSAQSELERTLANTRDAGFDLIEFSYLDPA-----DVDIGRLAKRIADLGLGVAISIGLPADGDISSADKAVAARGVEILNQTIALTRDLGGRKVAGILSAGHGLQVEAPTRDQWNRSAAALAKVAETAKAAG-VTLNLEIVNRFESNLLNTAAQGLAFIEDTGSDNIFLHLDTFHMNIEEADVGLAIRHAAGKIGYVHIGESHR--------------GFLGTGNIDFAAIFDALTAI-GYADDLSFESFSSEIVDENLSKKTAIWRNLWTDNMALAKHARAFIGLGLETARR----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116107 for 1996 contacts (-58.2/contact) +
2D Compatibility (PS) -27744 + (NN) -14996 + (LL) 1808
1D Compatibility (HY) -2400 + (ID) 2050
Total energy: -161489.0 ( -80.91 by residue)
QMean score : 0.491
|
|
|