Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNANGNLKKCPITISSYTLGT---EVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVT-EVEYITQ--WGTAEDR-TAEQQKKEQTTFHMARLFGVKHINCGL--LE--------KIPEEQIIVALGELCDRA---EELIIGLEFMPY---SGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVA--------------TGLEYAALKVYNATKKVLDEAWPEISPR |
3VYL Chain:A ((1-286)) | ---------MARIGIHSFVWSASSAQSELERTLANTRDAGFDLIEFSYLDPA-----DVDIGRLAKRIADLGLGVAISIGLPADGDISSADKAVAARGVEILNQTIALTRDLGGRKVAGILSAGHGLQVEAPTRDQWNRSAAALAKVAETAKAAG-VTLNLEIVNRFESNLLNTAAQGLAFIEDTGSDNIFLHLDTFHMNIEEADVGLAIRHAAGKIGYVHIGESHR--------------GFLGTGNIDFAAIFDALTAI-GYADDLSFESFSSEIVDENLSKKTAIWRNLWTDNMALAKHARAFIGLGLETARR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116107 for 1996 contacts (-58.2/contact) +
2D Compatibility (PS) -27744 + (NN) -14996 + (LL) 1808
1D Compatibility (HY) -2400 + (ID) 2050
Total energy: -161489.0 ( -80.91 by residue)
QMean score : 0.491
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