Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLD--YAYLAFDTPIQKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA-SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDLYFN |
2O7S Chain:A ((228-509)) | --RRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDN----LVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGL-------TVVVIGAGGAGKALAYGAKEKGA-VV----IANRTYERALELAEAIGG-A-------LSLTDLDNY--E--DGMVLANTTSMGMQPNVEETPISKDAL-KHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAP----KELYWQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O7S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122321 for 2213 contacts (-55.3/contact) +
2D Compatibility (PS) -27259 + (NN) -9649 + (LL) 2744
1D Compatibility (HY) -16400 + (ID) 4750
Total energy: -177635.0 ( -80.27 by residue)
QMean score : 0.598
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