Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
2YO3 Chain:A ((2-29))
-----KQIEDKIEEILSKIYHIENEIARIKKLI------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YO3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1978 for 102 contacts (19.4/contact) +
2D Compatibility (PS) -3349 + (NN) -4012 + (LL) 3828
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -3355.0 ( -32.89 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_2YO3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YO3-query.scw
PDB file :
Tito_Scwrl_2YO3.pdb
: