Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSDIIVADFWKNNEEILTDFDKDSFCESWTENEMWSIEFKVAQTPKNAHCYSFLDYESSVYFRGQ---EFVVKQLSHDAVGKTLSKDIRAPH--IYYTCQDGRQDDAITGSFTLEQCLTHIFKTDNRGFSWEIIDPSNILEKVQ-----------QENFGNNNYLT----------LIDQLLDDYG--VVVIPDNRHLVFKPREIYGAKTE-NFIRYKYNTDE-ASFDIDTLSLKTKIKGY--GKVDSNGNNYFSPITY----TSPEVEKWG----------------IRWQEPVSDERYTVAGNMQRRLKLELQD-YP-----ATTGSVILKNDYECEKGDYVLFIYEPLGIDYDV--QIVAYKKYPFTIKAPEITLSNNKKSIVSI------------MAQLAKVLKGAK |
| 4N0N Chain:A ((22-422)) | -SAVCTVC----GAAPVAKSACGGWFCGNCVPYHAG----HCHTTSLFANCGHDIMYRSTYCTMCEGSPKQMVPKVPHPILDHLLCHIDYGSKEELTLVVADGRTTSP-PGRYKVGHKVVAVVADVGGNIVFGCGPGSHIAVPLQDTLKGVVVNKALKNAAASEYVEGPPGSGKTFHLVKDVLAVVGSATLVVPTHASMLDCINKLKQAGADPYFVVPKYTVLDFPRPGSGNITVRLPQVGTSEGETFVDEVAYFSPVDLARILTQGRVKGYGDLNQLGCVGPASVPRNLWLRHFVSLEPLRVCHRFGAAVCDLIKGIYPYYEPAPHTTKVVFVPNPDFEKGVVITAYHKDRGLGHRTIDSIQGCTFPVVTLRLPTPQSLTRPRAVVAVTRASQELYIYDPFDQLSGLLKF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8188 for 2235 contacts (3.7/contact) +
2D Compatibility (PS) -34159 + (NN) -1977 + (LL) 1308
1D Compatibility (HY) -18400 + (ID) 2900
Total energy: -47940.0 ( -21.45 by residue)
QMean score : 0.130
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