Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLT-----PPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAILNQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN |
4D61 Chain:T ((6-63)) | ---------VKDVNQQEFVRALAAFLKK-------SGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH--------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4D61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -349 for 275 contacts (-1.3/contact) +
2D Compatibility (PS) -5538 + (NN) -1227 + (LL) 8984
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -1480.0 ( -5.38 by residue)
QMean score : 0.322
|
|
|