Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQG---NNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAIKEKVVGDVLSNAKVYFMLGKDET-KLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
| 4G4P Chain:A ((26-243)) | -------------------------------------TIGTDLTFAPFEFQDSKGKYIGIDVDLLDAIAKD-QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFSD-PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKNKEKYDYTIKNFDDA------TGLYKALENGEADAIVDDYPVLGYAVKNGQ-KLQLVGDKETGSSYGFAVKKGQNPELIKKFNAGLKNLKDNGTYDKILNNYL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61092 for 1777 contacts (-34.4/contact) +
2D Compatibility (PS) -22704 + (NN) -6678 + (LL) 3964
1D Compatibility (HY) -12400 + (ID) 3250
Total energy: -102160.0 ( -57.49 by residue)
QMean score : 0.470
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