Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQMASQNEQTDNSIVSEITYK----
2C1M Chain:B ((1-46))
MAK--------------------RVAEKELTDRNWDEEDEVEEMGTFSVASEEVMKNRAVKKAKRR
General information:
TITO was launched using:
RESULT:
Template:
2C1M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6459 for 127 contacts (50.9/contact) +
2D Compatibility (PS) -3923 + (NN) 3597 + (LL) 3220
1D Compatibility (HY) 400 + (ID) 350
Total energy: 9403.0 ( 74.04 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_2C1M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C1M-query.scw
PDB file :
Tito_Scwrl_2C1M.pdb
: